PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_290659g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 297aa    MW: 33614.9 Da    PI: 6.9441
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_290659g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.46e-14101152255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +r+h+++Er+RR++++ +++ L++llP+ +     +K s ++ +e+Av+Y+++L+
  MA_290659g0010 101 KRKHKMIERQRRQDMKARLSILKSLLPHeN---LRGKRSVSDHVEEAVNYVHHLE 152
                     678*************************66...9*******************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.28199151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.1E-1299171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-14100168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-11101152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.22E-12101156No hitNo description
SMARTSM003532.1E-6105157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MSSPSWLESE FLSCNDVIKE FDVENVLSSN PFLSTQPVED PSTYNTHHAK ICDSVDNFNS  60
GYLAGCPGHS NPVLMATFCD SSRPSDDQSR NILPGTLPSD KRKHKMIERQ RRQDMKARLS  120
ILKSLLPHEN LRGKRSVSDH VEEAVNYVHH LEKKVEDLQK EREKMKADSD KNAKVSVQGV  180
RLSCNKKFCL KAPAIGGSDR EFPTVKIKSM GSAVQVWTNT FEYQIVYSDL LMALEDGGLE  240
VVCATSSTIN NRVYHTIHSK VFDLNIFNID TLYQKVWHLI RTNHTQDQDS QTVDVQA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100111KRKHKMIERQRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LNH53e-82B8LNH5_PICSI; Putative uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1638838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.15e-19bHLH family protein